Step 3:Study / Site / StudyMember + 项目权限
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import uuid
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from typing import Sequence
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from sqlalchemy import select, update
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from sqlalchemy.ext.asyncio import AsyncSession
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from app.models.study_member import StudyMember
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from app.schemas.member import StudyMemberCreate, StudyMemberUpdate
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async def get_member(db: AsyncSession, study_id: uuid.UUID, user_id: uuid.UUID) -> StudyMember | None:
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result = await db.execute(
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select(StudyMember).where(StudyMember.study_id == study_id, StudyMember.user_id == user_id)
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)
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return result.scalar_one_or_none()
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async def get_member_by_id(db: AsyncSession, member_id: uuid.UUID) -> StudyMember | None:
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result = await db.execute(select(StudyMember).where(StudyMember.id == member_id))
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return result.scalar_one_or_none()
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async def add_member(db: AsyncSession, study_id: uuid.UUID, member_in: StudyMemberCreate) -> StudyMember:
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member = StudyMember(
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study_id=study_id,
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user_id=member_in.user_id,
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role_in_study=member_in.role_in_study,
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is_active=member_in.is_active,
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)
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db.add(member)
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await db.commit()
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await db.refresh(member)
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return member
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async def list_members(db: AsyncSession, study_id: uuid.UUID, skip: int = 0, limit: int = 100) -> Sequence[StudyMember]:
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result = await db.execute(
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select(StudyMember).where(StudyMember.study_id == study_id).offset(skip).limit(limit)
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)
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return result.scalars().all()
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async def update_member(db: AsyncSession, member: StudyMember, member_in: StudyMemberUpdate) -> StudyMember:
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update_data = {k: v for k, v in member_in.model_dump(exclude_unset=True).items() if v is not None}
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if update_data:
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await db.execute(
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update(StudyMember)
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.where(StudyMember.id == member.id)
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.values(**update_data)
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)
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await db.commit()
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await db.refresh(member)
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return member
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async def remove_member(db: AsyncSession, member: StudyMember) -> StudyMember:
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await db.execute(
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update(StudyMember)
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.where(StudyMember.id == member.id)
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.values(is_active=False)
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)
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await db.commit()
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await db.refresh(member)
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return member
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@@ -0,0 +1,48 @@
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import uuid
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from typing import Sequence
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from sqlalchemy import select, update
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from sqlalchemy.ext.asyncio import AsyncSession
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from app.models.site import Site
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from app.schemas.site import SiteCreate, SiteUpdate
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async def create_site(db: AsyncSession, study_id: uuid.UUID, site_in: SiteCreate) -> Site:
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site = Site(
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study_id=study_id,
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name=site_in.name,
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city=site_in.city,
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pi_name=site_in.pi_name,
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contact=site_in.contact,
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is_active=site_in.is_active,
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)
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db.add(site)
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await db.commit()
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await db.refresh(site)
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return site
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async def get_site(db: AsyncSession, site_id: uuid.UUID) -> Site | None:
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result = await db.execute(select(Site).where(Site.id == site_id))
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return result.scalar_one_or_none()
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async def update_site(db: AsyncSession, site: Site, site_in: SiteUpdate) -> Site:
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update_data = site_in.model_dump(exclude_unset=True)
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if update_data:
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await db.execute(
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update(Site)
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.where(Site.id == site.id)
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.values(**update_data)
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)
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await db.commit()
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await db.refresh(site)
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return site
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async def list_by_study(db: AsyncSession, study_id: uuid.UUID, skip: int = 0, limit: int = 100) -> Sequence[Site]:
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result = await db.execute(
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select(Site).where(Site.study_id == study_id).offset(skip).limit(limit)
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)
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return result.scalars().all()
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@@ -0,0 +1,71 @@
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import uuid
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from typing import Sequence
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from sqlalchemy import select, update
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from sqlalchemy.ext.asyncio import AsyncSession
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from app.models.study import Study
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from app.schemas.study import StudyCreate, StudyUpdate
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async def create(db: AsyncSession, study_in: StudyCreate, *, created_by: uuid.UUID | None = None) -> Study:
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study = Study(
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code=study_in.code,
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name=study_in.name,
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sponsor=study_in.sponsor,
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protocol_no=study_in.protocol_no,
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phase=study_in.phase,
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status=study_in.status,
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created_by=created_by,
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)
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db.add(study)
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await db.commit()
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await db.refresh(study)
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return study
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async def get(db: AsyncSession, study_id: uuid.UUID) -> Study | None:
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result = await db.execute(select(Study).where(Study.id == study_id))
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return result.scalar_one_or_none()
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async def get_by_code(db: AsyncSession, code: str) -> Study | None:
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result = await db.execute(select(Study).where(Study.code == code))
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return result.scalar_one_or_none()
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async def update(db: AsyncSession, study: Study, study_in: StudyUpdate) -> Study:
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update_data = study_in.model_dump(exclude_unset=True)
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if update_data:
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await db.execute(
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update(Study)
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.where(Study.id == study.id)
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.values(**update_data)
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)
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await db.commit()
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await db.refresh(study)
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return study
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async def list_studies(db: AsyncSession, skip: int = 0, limit: int = 100) -> Sequence[Study]:
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result = await db.execute(select(Study).offset(skip).limit(limit))
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return result.scalars().all()
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async def list_studies_for_user(
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db: AsyncSession,
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user_id: uuid.UUID,
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skip: int = 0,
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limit: int = 100,
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) -> Sequence[Study]:
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from app.models.study_member import StudyMember # local import to avoid cycles
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stmt = (
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select(Study)
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.join(StudyMember, StudyMember.study_id == Study.id)
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.where(StudyMember.user_id == user_id, StudyMember.is_active.is_(True))
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.offset(skip)
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.limit(limit)
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)
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result = await db.execute(stmt)
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return result.scalars().all()
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