Step 3:Study / Site / StudyMember + 项目权限

This commit is contained in:
Cheng Zhou
2025-12-16 16:42:42 +08:00
parent 65df698570
commit f3692e1145
66 changed files with 639 additions and 6 deletions
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import uuid
from typing import Sequence
from sqlalchemy import select, update
from sqlalchemy.ext.asyncio import AsyncSession
from app.models.study_member import StudyMember
from app.schemas.member import StudyMemberCreate, StudyMemberUpdate
async def get_member(db: AsyncSession, study_id: uuid.UUID, user_id: uuid.UUID) -> StudyMember | None:
result = await db.execute(
select(StudyMember).where(StudyMember.study_id == study_id, StudyMember.user_id == user_id)
)
return result.scalar_one_or_none()
async def get_member_by_id(db: AsyncSession, member_id: uuid.UUID) -> StudyMember | None:
result = await db.execute(select(StudyMember).where(StudyMember.id == member_id))
return result.scalar_one_or_none()
async def add_member(db: AsyncSession, study_id: uuid.UUID, member_in: StudyMemberCreate) -> StudyMember:
member = StudyMember(
study_id=study_id,
user_id=member_in.user_id,
role_in_study=member_in.role_in_study,
is_active=member_in.is_active,
)
db.add(member)
await db.commit()
await db.refresh(member)
return member
async def list_members(db: AsyncSession, study_id: uuid.UUID, skip: int = 0, limit: int = 100) -> Sequence[StudyMember]:
result = await db.execute(
select(StudyMember).where(StudyMember.study_id == study_id).offset(skip).limit(limit)
)
return result.scalars().all()
async def update_member(db: AsyncSession, member: StudyMember, member_in: StudyMemberUpdate) -> StudyMember:
update_data = {k: v for k, v in member_in.model_dump(exclude_unset=True).items() if v is not None}
if update_data:
await db.execute(
update(StudyMember)
.where(StudyMember.id == member.id)
.values(**update_data)
)
await db.commit()
await db.refresh(member)
return member
async def remove_member(db: AsyncSession, member: StudyMember) -> StudyMember:
await db.execute(
update(StudyMember)
.where(StudyMember.id == member.id)
.values(is_active=False)
)
await db.commit()
await db.refresh(member)
return member
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import uuid
from typing import Sequence
from sqlalchemy import select, update
from sqlalchemy.ext.asyncio import AsyncSession
from app.models.site import Site
from app.schemas.site import SiteCreate, SiteUpdate
async def create_site(db: AsyncSession, study_id: uuid.UUID, site_in: SiteCreate) -> Site:
site = Site(
study_id=study_id,
name=site_in.name,
city=site_in.city,
pi_name=site_in.pi_name,
contact=site_in.contact,
is_active=site_in.is_active,
)
db.add(site)
await db.commit()
await db.refresh(site)
return site
async def get_site(db: AsyncSession, site_id: uuid.UUID) -> Site | None:
result = await db.execute(select(Site).where(Site.id == site_id))
return result.scalar_one_or_none()
async def update_site(db: AsyncSession, site: Site, site_in: SiteUpdate) -> Site:
update_data = site_in.model_dump(exclude_unset=True)
if update_data:
await db.execute(
update(Site)
.where(Site.id == site.id)
.values(**update_data)
)
await db.commit()
await db.refresh(site)
return site
async def list_by_study(db: AsyncSession, study_id: uuid.UUID, skip: int = 0, limit: int = 100) -> Sequence[Site]:
result = await db.execute(
select(Site).where(Site.study_id == study_id).offset(skip).limit(limit)
)
return result.scalars().all()
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import uuid
from typing import Sequence
from sqlalchemy import select, update
from sqlalchemy.ext.asyncio import AsyncSession
from app.models.study import Study
from app.schemas.study import StudyCreate, StudyUpdate
async def create(db: AsyncSession, study_in: StudyCreate, *, created_by: uuid.UUID | None = None) -> Study:
study = Study(
code=study_in.code,
name=study_in.name,
sponsor=study_in.sponsor,
protocol_no=study_in.protocol_no,
phase=study_in.phase,
status=study_in.status,
created_by=created_by,
)
db.add(study)
await db.commit()
await db.refresh(study)
return study
async def get(db: AsyncSession, study_id: uuid.UUID) -> Study | None:
result = await db.execute(select(Study).where(Study.id == study_id))
return result.scalar_one_or_none()
async def get_by_code(db: AsyncSession, code: str) -> Study | None:
result = await db.execute(select(Study).where(Study.code == code))
return result.scalar_one_or_none()
async def update(db: AsyncSession, study: Study, study_in: StudyUpdate) -> Study:
update_data = study_in.model_dump(exclude_unset=True)
if update_data:
await db.execute(
update(Study)
.where(Study.id == study.id)
.values(**update_data)
)
await db.commit()
await db.refresh(study)
return study
async def list_studies(db: AsyncSession, skip: int = 0, limit: int = 100) -> Sequence[Study]:
result = await db.execute(select(Study).offset(skip).limit(limit))
return result.scalars().all()
async def list_studies_for_user(
db: AsyncSession,
user_id: uuid.UUID,
skip: int = 0,
limit: int = 100,
) -> Sequence[Study]:
from app.models.study_member import StudyMember # local import to avoid cycles
stmt = (
select(Study)
.join(StudyMember, StudyMember.study_id == Study.id)
.where(StudyMember.user_id == user_id, StudyMember.is_active.is_(True))
.offset(skip)
.limit(limit)
)
result = await db.execute(stmt)
return result.scalars().all()