Step 8:数据管理(Queries + SDV/SDR 进度)
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import uuid
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from datetime import date
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from fastapi import APIRouter, Depends, HTTPException, status
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from sqlalchemy.ext.asyncio import AsyncSession
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from app.core.deps import get_current_user, get_db_session, require_study_member, require_study_roles
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from app.crud import data_query as dq_crud
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from app.crud import audit as audit_crud
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from app.crud import study as study_crud
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from app.schemas.data_query import DataQueryCreate, DataQueryRead, DataQueryUpdate
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router = APIRouter()
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def _is_overdue(dq: DataQueryRead) -> bool:
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return bool(dq.due_date and date.today() > dq.due_date and dq.status != "CLOSED")
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async def _ensure_study_exists(db: AsyncSession, study_id: uuid.UUID):
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study = await study_crud.get(db, study_id)
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if not study:
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raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="Study not found")
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return study
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@router.post(
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"/",
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response_model=DataQueryRead,
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status_code=status.HTTP_201_CREATED,
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dependencies=[Depends(require_study_roles(["PM", "CRA"]))],
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)
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async def create_query(
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study_id: uuid.UUID,
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query_in: DataQueryCreate,
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db: AsyncSession = Depends(get_db_session),
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current_user=Depends(get_current_user),
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) -> DataQueryRead:
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await _ensure_study_exists(db, study_id)
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try:
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dq = await dq_crud.create_query(db, study_id, query_in, created_by=current_user.id)
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except ValueError as exc:
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raise HTTPException(status_code=status.HTTP_400_BAD_REQUEST, detail=str(exc)) from exc
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await audit_crud.log_action(
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db,
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study_id=study_id,
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entity_type="data_query",
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entity_id=dq.id,
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action="CREATE_DATA_QUERY",
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detail=f"DataQuery {dq.id} created",
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operator_id=current_user.id,
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operator_role=current_user.role,
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)
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obj = DataQueryRead.model_validate(dq)
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obj.is_overdue = _is_overdue(obj)
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return obj
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@router.get(
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"/",
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response_model=list[DataQueryRead],
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dependencies=[Depends(require_study_member())],
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)
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async def list_queries(
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study_id: uuid.UUID,
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status_filter: str | None = None,
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site_id: uuid.UUID | None = None,
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subject_id: uuid.UUID | None = None,
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assigned_to: uuid.UUID | None = None,
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overdue: bool | None = None,
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category: str | None = None,
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priority: str | None = None,
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skip: int = 0,
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limit: int = 100,
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db: AsyncSession = Depends(get_db_session),
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) -> list[DataQueryRead]:
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await _ensure_study_exists(db, study_id)
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queries = await dq_crud.list_queries(
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db,
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study_id,
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status=status_filter,
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site_id=site_id,
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subject_id=subject_id,
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assigned_to=assigned_to,
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overdue=overdue,
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category=category,
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priority=priority,
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skip=skip,
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limit=limit,
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)
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result: list[DataQueryRead] = []
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for q in queries:
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obj = DataQueryRead.model_validate(q)
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obj.is_overdue = _is_overdue(obj)
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result.append(obj)
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return result
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@router.get(
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"/{query_id}",
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response_model=DataQueryRead,
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dependencies=[Depends(require_study_member())],
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)
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async def get_query(
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study_id: uuid.UUID,
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query_id: uuid.UUID,
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db: AsyncSession = Depends(get_db_session),
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) -> DataQueryRead:
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await _ensure_study_exists(db, study_id)
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dq = await dq_crud.get_query(db, query_id)
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if not dq or dq.study_id != study_id:
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raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="DataQuery not found")
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obj = DataQueryRead.model_validate(dq)
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obj.is_overdue = _is_overdue(obj)
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return obj
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@router.patch(
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"/{query_id}",
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response_model=DataQueryRead,
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dependencies=[Depends(require_study_roles(["PM", "CRA"]))],
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)
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async def update_query(
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study_id: uuid.UUID,
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query_id: uuid.UUID,
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query_in: DataQueryUpdate,
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db: AsyncSession = Depends(get_db_session),
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current_user=Depends(get_current_user),
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) -> DataQueryRead:
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await _ensure_study_exists(db, study_id)
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dq = await dq_crud.get_query(db, query_id)
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if not dq or dq.study_id != study_id:
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raise HTTPException(status_code=status.HTTP_404_NOT_FOUND, detail="DataQuery not found")
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old_status = dq.status
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updated = await dq_crud.update_query(db, dq, query_in)
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detail = None
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action = "UPDATE_DATA_QUERY"
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if query_in.status and query_in.status != old_status:
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detail = f"DataQuery {query_id} status {old_status} -> {query_in.status}"
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action = "DATA_QUERY_STATUS_CHANGE"
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await audit_crud.log_action(
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db,
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study_id=study_id,
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entity_type="data_query",
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entity_id=query_id,
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action=action,
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detail=detail or "DataQuery updated",
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operator_id=current_user.id,
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operator_role=current_user.role,
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)
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obj = DataQueryRead.model_validate(updated)
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obj.is_overdue = _is_overdue(obj)
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return obj
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